Publications

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2017

  • F. Mougin, D. Auber, R. Bourqui, G. Diallo, I. Dutour, V. Jouhet, F. Thiessard, R. Thiébaut, P. Thébault. Visualizing omics and clinical data: which challenges for dealing with their variety?. Methods. In Press. [Link]
  • N. Kamel, G. Diallo, S. Ben Yahia. Special Issue on Computational Intelligence for Big Data. Int. J. Reasoning-based Intelligent Systems (IJRIS). Vol. 9, No. 1, 2017. Guest Editors. [Link]
  • M. Kachroudi, G. Diallo, S. Ben Yahia. On the Composition of Large Biomedical Ontologies Alignment. ACM Proceedings of the 7th International Conference on Web Intelligence, Mining and Semantics (WIMS'17). pp:24:1--24:10, June 19-22th 2017, Amantea, Italy. Doi:10.1145/3102254.3102284. [Link]
  • S. El Hajjami, M. Berrada, M. Harti, G. Diallo. Towards An Agent-Based Approach For Multidimensional Analyses of Semantic Web Data. Proceedings of the International Conference on Intelligent Systems and Computer Vision. April 17-19th 2017, Fez, Morocco.

2016

  • K. Dramé, F. Mougin G. Diallo. Large scale biomedical texts classification: a kNN and an ESA-based approaches. J. Biomedical Semantics. Vol:7(40), 2016. DOI Information: 10.1186/s13326-016-0073-1. [Link]
  • H. Akremi, S. Zghal, G. Diallo. Modeling of uncertainty: Fuzzification of medical ontology. WIMS '16: ACM Proceedings of the 6th International Conference on Web Intelligence, Mining and Semantics. Nîmes, France — June 13 - 15, 2016. [Link]
  • M. Sawadogo, M.S. Borlli, G. Diallo. Alignement Interactif d'Ontologies avec ServOMap. Technique et Science Informatiques . VOL 35/1 - 2016 - pp.55-74 - doi:10.3166/tsi.35.55-74.
  • R. Gini, M. Schuemie, J. Brown, P. Ryan, E. Vacchi, M. Coppola, W. Cazzola, P. Coloma, R. Berni, G. Diallo, J. L. Oliveira, P. Avillach, G. Trifirò, P. Rijnbeek, M. Bellentani, J. van Der Lei, N. Klazinga, M. Sturkenboom. Data Extraction And Management In Networks Of Observational Health Care Databases For Scientific Research: A Comparison Among EU-ADR, OMOP, Mini-Sentinel And MATRICE Strategies. eGEMs (Generating Evidence & Methods to improve patient outcomes) . Vol. 4 (2016):1. [Link]

2015

  • A. Khiat, G. Diallo, Beyza Yaman, E. Jiménez-Ruiz, M. Benaissa. ABOM and ADOM: Arabic Datasets for the Ontology Alignment Evaluation Campaign. Proceedings of ODBASE'2015. Lecture Notes in Computer Science, vol 9415. pp 545-553. 2015
  • N. Kheder, G. Diallo. ServOMBI at OAEI 2015. Proceedings of the 10th International Workshop on Ontology Matching collocated with the 14th International Semantic Web Conference (ISWC 2015), Bethlehem, PA, USA, October 12, 2015. CEUR Workshop Proceedings 1545. pp 200-207.
  • Z. Mambone, M. Sawadogo, M.S. Borlli, G. Diallo. DServO: A Peer-to-Peer-based. Approach. to. Biomedical. Ontology. Repositories. Studies in Health Technology and Informatics, Volume 216, pp1103 - 1103, 2015.
  • E. Mutafungwa, F. Thiessard, MP. Diallo, R. Gore, V. Jouhet, F. Mougin, S. Ben Yahia, C. Karray, N. Kheder, R. Saddem, J. Hämäläinend, G. Diallo. Mobile Data as Public Health Decision Enabler: A Case Study of Cardiac and Neurological Emergencies. Proceedings of the Orange D4D Challenge, in conjunction with the 4th International conference on the scientific analysis of mobile phone datasets (NetMob'2015), 7-10 April 2015, MIT Media Lab, Cambridge, MA, USA. [Winner of the Prize of the Practiclal Application]

2014

  • G. Diallo. An effective method of large scale ontology matching. Journal of Biomedical Semantics, vol:5(44), 2014. DOI:10.1186/2041-1480-5-44
  • M. Savadogo, BMJ. Some, G. Diallo. Alignement interactif d'ontologies avec ServOMap. 5th Journées Francophones sur les Ontologies (JFO), 14-16 Nov. 2014, Hammamet, Tunisie. [HAL].
  • K. Dramé, G. Diallo, F. Delva, JF. Dartigues, E. Mouillet, R. Salamon, F. Mougin. Reuse of termino-ontological resources and text corpora for building a multilingual domain ontology: an application to Alzheimer’s disease. J. Biomedical Informatics, vol. 48 (april 2014). DOI information:10.1016/j.jbi.2013.12.013
  • K. Dramé, F. Mougin, G. Diallo. A k-nearest neighbor based method  for improving large scale biomedical document indexing. The 6th International Symposium on Semantic Mining in Biomedicine (SMBM), 6th-7th October, 2014, Aveiro, Portugal
  • K. Dramé, F. Mougin, G. Diallo. Query expansion using external resources for improving information retrieval in the biomedical domain. CEUR WS Lab Proceedings for CLEF 2014. Vol-1180:189-194

2013

  • B. Kamsu-Foguem, G. Diallo, C. Foguem. Conceptual Graphs-based Knowledge Specification for Supporting Reasoning in African Traditional Medicine. Engineering Applications of Artificial Intelligence, Volume 26 Issue 4, April, 2013. Pages 1348-1365. DOI information: 10.1016/j.engappai.2012.12.004
  • P. Lopes, T. Nunes, D. Campos, LI. Furlong, A. Bauer-Mehren, F. Sanz, M.C. Carrascosa, J. Mestres, J. Kors, B. Singh, E. van Mulligen, J. Van der Lei, G. Diallo, P. Avillach, E. Ahlberg, S. Boyer, C. Diaz, J.L. Oliveira. Gathering and Exploring Scientific Knowledge in Pharmacovigilance. PloS one, vol. 8(12), 2013.
  • M. Ba, G. Diallo. Large scale biomedical ontology matching with ServOMap. IRBM, Volume 34, Issue 1, February 2013, Pages 56-59. DOI:10.1016/j.irbm.2012.12.011
  • A. Kammoun, G. Diallo. ServOMap results for OAEI 2013. The 8th International Workshop on Ontology Matching (OM-2013), collocated with the 12th International Semantic Web Conference (ISWC'2013)
  • G. Diallo, A. Kammoun. Towards Learning Based Strategy for Improving the Recall of the ServOMap Matching System. CEUR Workshop Proceedings SWAT4LS'2013, Vol-1114
  • P. Avillach, J-C. Dufour, G. Diallo, F. Salvo, M. Joubert, F. Thiessard, F. Mougin, G. Trifiro, A. Fourrier-Reglat, A. Pariente, M. Fieschi. Design and Validation of an Automated Method to Detect Known Adverse Drug Reactions in MEDLINE: a Contribution from the EU-ADR Project. J Am Med Inform Assoc.(JAMIA),20:446-452, 2013doi:10.1136/amiajnl-2012-001083

2012

  • G. Diallo, M. Ba. Effective method for large scale ontology matching. CEUR-WS Proceedings of the 5th International Workshop on Semantic Web Applications and Tools for Life Sciences (SWAT4LS 2012), Vol-952. 2012. 
  • M. Ba, G. Diallo. ServOMap and ServOMap-lt results for OAEI 2012. The 7th International Workshop on Ontology Matching (OM 2012), collocated with the 11th International Semantic Web Conference (ISWC'2012), CEUR Workshop Proceedings. Vol 946.
  • M. Ba, G. Diallo. Knowledge Repository as Semantic Similarity Enabler. IEEE Proceedings of the 8th International Conference on Signal Image Technology & Internet Based Systems (SITIS'12). 26-29 Nov 2012, Naples, Italy. 
  • J.L. Oliveira, P. Lopes, T. Nunes, D. Campos, S. Boyer, E. Ahlberg, E. Mulligen, J. Kors, B. Singh, L. Furlong, A. Bauer-Mehren, M. Carrascosa, J. Mestres, P. Avillach, G. Diallo, C. Diaz Acedo, J. van der Lei. The EU-ADR Web Platform: Delivering advanced pharmacovigilance tools. Pharmacoepidem. Drug Safe. 2012. [link]
  • A. Bauer-Mehren, EM. van Mullingen, P. Avillach, MC. Carrascosa, R. Garcia-Serna, J. Pinero, B. Singh, P Lopes, JL. Oliveira, G. Diallo, J. Mestres, E. Ahlberg Helgee, S. Boyer, F. Sanz, JA. Kors, LI. Furlong. Automatic filtering and substantiation of drug safety signals. PLoS Computational Biology 8(4): 2012. e1002457. doi:10.1371/journal.pcbi.1002457. [link]
  • G. Diallo, M. Simonet. Towards Dynamic Ontologies Repository Building. SIGHIT Record 2(1): 27 (2012).
  • G. Diallo, N. Grabar, F. Thiessard, N., Garcelon, J. Grosjean, M. Dupuch, S., Bento-Pereira, B. Frandji, SJ. Daroni, M. Cuggia. Towards complex queries on data from complex patients. AMIA 2012 Annual Symposium, November 3-7 2012, Chicago, USA. Poster paper
  • K. Drame, G. Diallo, F. Mougin. Towards a bilingual Alzheimer's disease terminology acquisition using a parallel corpus. Stud Health Technol Inform. 2012;180:179-83
  • F. Thiessard, F. Mougin, G. Diallo, V. Jouhet, S. Cossin, N. Garcelon, B. Campillo, W. Jouini, J. Grosjean, P. Massari,  N. Griffon, M. Dupuch, F. Tayalati, E. Dugas, A. Balvet, N. Grabar, S. Pereira, B. Frandji, S. Darmoni, M. Cuggia. RAVEL: Retrieval And Visualization in ELectronic health records. Stud Health Technol Inform. 2012;180:194-8.
  • R. Gini, M. Coppola, P. Ryan, G. Righetti, I. Peri, R. Berni, P. Avillach, P. Coloma, G. Trifirò, G. Diallo, J. van der Lei, M. Sturkenboom, M. Schuemie. Frameworks for data extraction and management from electronic healthcare databases for multi-center epidemiologic studies: a comparison among EU-ADR, MATRICE, and OMOP strategies. 24th European Medical Informatics Conference - MIE2012. 26-29th August 2012, Pisa, Italy. accepted for a workshop.

2011

  • G. Diallo. Towards decentralized and cooperative repositories of distributed ontologies. ACM Proceedings ofthe 4th International SWAT4LS Workshop:Semantic Web Applications and Tools for Life Sciences (SWAT4LS,11). pp 8-9, 2012.
  • G. Diallo. Efficient building of local repository of distributed ontologies. IEEE Proc. of the 7th International Conference on Signal Image Technology & Internet Based Systems (SITIS'11). K Yetongnon, R Chbeir and A Dipanda eds. Nov 28- Dec 1st 2011, Dijon, France. [paper].

2009

  • D. Tapucu, G. Diallo, Y. Ait Ameur, M. O. Unalir. Ontology-based Database Approach for Handling Preferences. In Data Warehousing Design and Advanced Engineering Applications: Methods for Complex Construction. Ladjel Bellatreche (eds), IGI Global, 2009. ISBN 978-1-60566-756.
  • M. Simonet, R. Messai, G. Diallo, A. Simonet. Ontologies in the Health Field.  In Data Mining and Medical Knowledge Management: Cases and Applications, P. Berka, J. Rauch, D. Abdelkader Zighed (eds) IGI Global, 2008. ISBN 978-1-60566-218-3.
  • H. Oliver,  G. Diallo, E. de Quincey, D. Alexopoulou, B. Habermann, P. Kostkova, M. Schroeder, S. Jupp, K. Khelif, R. Stevens, G. Jawaheer, G. Madle. A user-centred evaluation framework for the Sealife semantic web browsers. BMC BioinformaticsSuppl 10:S14  2009
  • D. Tapucu, G. Diallo, Stéphane Jean, Yamine Ait Ameur, Murat Osman Ünalir, Nacima Belaidi.  Définition et Exploitation des Préférences au Niveau Sémantique. 3èms Journées Francophones sur les Ontologies (JFO'09), Poitiers, France. 3-4 Décembre 2009.
  • E. de Quincey, H. Oliver, P. Kostokova, G. Jawaheer, G. Madle, G. Diallo, D. Alexopoulou, M. Shroeder, B. Habermann, K. Khelif, S. Jupp, R. Stevens.  Mining for Pattern of Semantic Link Usage: Do Domain Users Actually Like Semantic Browing? International Workshop on Intelligent Web Intereaction (IWI'09), Milano, Italy. 2009.

2008

  • G. Diallo, K. Khelif, O. Corby, P. Kostkova, Gemma Madle. Semantic Browsing of a Domain Related Resources: The Corese-NeLI Framework, Proc. Int. Workshop on Web Information Retrieval Support Systems (held with the 2008 IEEE/WIC/ACM Int. WI'08 Conference), 9-12 December 2008, Sidney, Australia. AR: 24%.
  • P. Kostkova, G. Diallo, G. Jawaheer.   User Profiling for Semantic Browsing in Medical Digital Librairies. 5th European Semantic Web Conference (ESWC'08), 01-05th of June 2008, Tenerife, Spain. 
  • G. Diallo, P. Kostkova, G. Jawaheer, S. Jupp, R. Stevens. Process of Building a Vocabulary for the Infection Domain. 21st IEEE International Symposium on Computer-Based Medical Systems,  17-19th June 2008, Jyvaskyla, Finland.  AR: 35%.

2007

  • M-H. Pham, D. Bernhard, G. Diallo, R. Messai, M. Simonet.   SOM-based Clustering of Multilingual Documents Using an Ontology. In Data Mining with Ontologies: Implementations, Findings and Frameworks. H.O. Nigro, S.C. Cisaro, D. Xodo (Eds.), IGI Global. ISBN: 978-1-59904-618-1, 2007.
  • P. Kostkova, G. Diallo, G. Jawaheer. Application of User Profiling on Ontology Module Extraction for Medical Portals.  In Proceedings of MedInfo Workshops, MedSemWeb 2007, "What Semantics Do We Need for A Semantic Web for Medicine?", Brisbane, Australia, August 2007.

2006

  • G. Diallo, M. Simonet, A. Simonet. An Approach to Automatic Ontology-based Annotation of Biomedical Texts. In Proceedings of IEA/AIE'06, Springer Lecture Notes in Artificial Intelligence, vol. 4031, Annecy, France, 2006, pp 1024-1033. [link].
  • G. Diallo, M. Simonet, A. Simonet. Bringing Together Structured and Unstructured Sources: the OUMSUIS Approach. International Workshop on Knowledge Systems in Bioinformatics (KSinBIT’06), in conjunction with OTM'06, Lecture Notes in Computer Science  Vol. 4277 pp.699-709, Springer-Verlag, 2006.[link].
  • M. Simonet, R. Patriarche, D. Bernhard, G. Diallo, S. Ferriol, P. Palmer. Multilingual Ontology Enrichment for Semantic Annotation and Retrieval of Medical Information.  In Proceedings of MEDNET’06, Toronto, Canada, October 17th-20th, 2006.

2005

  • R. Patriarche, S. Gedzelman, G. Diallo, D. Bernhard, C.G Bassolet, S. Ferriol, A. Girard, M. Mouries, P. Palmer, M. Simonet. A Tool for Textual and Conceptual Annotation of Documents. In Innovation and the Knowledge Economy , Volume 2, Issues, Applications, Case Studies (Proc. of Intl. conference eChallenges 2005); Paul Cunningham and Miriam Cunningham (eds); IOS Press, pp.865-872. ISSN 1574-1230, ISBN 1-58603-563-0. 2005.
  • M. Simonet, D. Bernhard, G. Diallo, S. Gedzelman, R. Patriarche. An environment for ontology design and enrichment from texts.  In Proceedings of SWAP05 - Semantic Web Applications and Perspectives 2nd Italian Semantic Web Workshop, Trento(Italy), 15-16 December, 2005. CEUR Workshop Proceedings, ISSN 1613-0073. [pdf].
  • S. Gedzelman, M. Simonet, D. Bernhard, G. Diallo, P. Palmer. Building an ontology of Cardio-Vascular diseases for Concept-Based Information Retrieval. IEEE Proceedings Computers in Cardiology, Vol.32: pp.255-258, 2005.

2003

  • M. Simonet, G. Diallo, G., Palmer, A. Simonet. (2003). Ontologies pour l'organisation des connaissances - vers une ontologie anatomo-fonctionnelle du cerveau. Santé et Systémique (Hermès-Lavoisier), 7(1):44-75.

Other International Publications

  • G. Diallo, M. Simonet. Towards Dynamic Ontologies Repository Building. ACM SIGHIT International Health Informatics Symposium (IHI 2012). January, 28-30 2012, Miami, Florida, USA. (Extended Abstract paper).
  • G. Diallo, K. Dramé, F. Delva, JF. Dartigues, F. Mougin. Representing and accessing scientific knowledge about the Alzheimer's Disease: the Semantic BiblioDem Portal. 4th ICST International Conference on eHealth (eHealth 2011),21-23 Nov 2011, Malaga, Spain.( Poster paper).
  • G. Diallo, G. Maddle, G. Jawaheer, P. Kostkova, D. Alexopoulou, R. Stevens, S. Jupp, K. Khelif. A User Centered Evaluation Framework for the SeaLife Semantic Web Browser.  International Workshop on Semantic Web Applications and Tools for Life Sciences (SWAT4LS), 28th November 2008, Edinburgh, UK. ( Poster paper).

French Conferences & Workshops

  • M. Kachroudi, G. Diallo, S. Ben Yahia. Initiating Cross-Lingual Ontology Alignment with Information Retrieval Techniques. 6èmes Jounrnées Francophons sur les Ontologies (JFO'2016), 13 - 14 Octobre 2016, Bordeaux, France.
  • B. Thiao-Layel, V. Jouhet, G. Diallo. K-Ware: vers une gestion conjointe de ressources sémantiques et leurs alignements. 6èmes Jounrnées Francophons sur les Ontologies (JFO'2016), 13 - 14 Octobre 2016, Bordeaux, France.
  • H. Akremi, S. Zghal, V. Jouhey, G. Diallo. FONTO : Une nouvelle méthode de fuzzification d’ontologies. 6èmes Jounrnées Francophons sur les Ontologies (JFO'2016), 13 - 14 Octobre 2016, Bordeaux, France.
  • G. Diallo, M. Ba. Matching à large échelle d'ontologies: l'approche ServOMap. 13e Conférence Francophone sur l'Extraction et la Gestion des Connaissances 29 janvier - 01 février 2013, Toulouse, France. Poster.
  • K. Dramé, G. Diallo, F. Mougin. Construction d’une ontologie bilingue de la maladie d’Alzheimer à partir de textes médicaux.  Atelier IC pour l'Interopérabilté Sémantique dans les applications en e-Santé, 26 Juin 2012, Paris, France.
  • R. Patriarche, S. Gedzelman, G. Diallo, D. Bernhard, C.G Bassolet, S. Ferriol, A. Girard, M. Mouries, P. Palmer, M. Simonet.  Noesis Annotation Tool: Un outil pour l’annotation textuelle et conceptuelle de documents. ActesIngenierie des Connaissances IC'2005, Nice (France) Mai 2005.
  • R. Patriarche, S. Gedzelman, G. Diallo, D. Bernhard, C.G. Bassolet, S. Ferriol, A. Girard, M. Mouries, P. Palmer, M.Simonet. Un outil pour l'annotation textuelle et conceptuelle de document. Démonstration à TIA 2005, Rouen (France) 4 et 5 avril 2005.
  • M. Simonet, D. Bernhard, G. Diallo, P. Palmer, S. Ferriol, F. Baldesare, H. Cool, D. Christoffel. Enrichissement d'une ontologie multilingue à partir de textes pour le cancer du sein. Journée Web Sémantique Médical WSM'04, Mars 2004 Rouen (France).
  • G. Diallo, D. Bernhard, B. Batrancourt, M. Simonet.  Vers une Ontologie Anatomo-Fonctionnelle du Cerveau. Journée Web Sémantique Médical WSM'03, Mars 2003 Rennes (France).

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